
   20-Dec-2020 16:08:23 +0100

rootdir = ..\191113_Bob_HumanBlood2\
sampleName = H04_Warm
measNums = 1 2 3 5 6 7 8 
frameNums = 3000 3000 3000 3000 3000 3000 3000 
pixSizeReal = 0.34
pixSizeRec = 0.34
exportMatName = _data_export
firstImageBeforeChannelBegin = 1
lastImageAfterChannelEnd = 1
createResultSubDir = 1
writeStatImages = 1
writeImages = 0
enableFlag = 0
areaRatioFilterLevel = 0.7
areaRatioMax = 1.2
Converting 'M1_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1357 cell sequences
cell traces covers the whole channel: 578 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 45
write results (533 cells):
----------
----------
533 cells written
Converting 'M2_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 834 cell sequences
cell traces covers the whole channel: 479 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 70
write results (409 cells):
----------
----------
409 cells written
Converting 'M3_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 495 cell sequences
cell traces covers the whole channel: 255 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 59
write results (196 cells):
----------
----------
196 cells written
Converting 'M5_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1603 cell sequences
cell traces covers the whole channel: 790 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 61
write results (729 cells):
----------
----------
729 cells written
Converting 'M6_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1243 cell sequences
cell traces covers the whole channel: 620 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 75
write results (545 cells):
----------
----------
545 cells written
Converting 'M7_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1271 cell sequences
cell traces covers the whole channel: 499 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 28
write results (471 cells):
----------
----------
471 cells written
Converting 'M8_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 310 cell sequences
cell traces covers the whole channel: 181 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 15
write results (166 cells):
----------
----------
166 cells written
measurement: ..\191113_Bob_HumanBlood2\H04_Warm\Online\
cell counts:
M#	Th	wholeChannel	areaRatio	written
1	1357	578	533	533
2	834	479	409	409
3	495	255	196	196
5	1603	790	729	729
6	1243	620	545	545
7	1271	499	471	471
8	310	181	166	166

   10-Mar-2022 00:04:33 +0100

rootdir = ..\191113_Bob_HumanBlood2\
sampleName = 191113_H04_8nlps_Warm
measNums = 1 2 3 5 6 7 8 
frameNums = 3000 3000 3000 3000 3000 3000 3000 
pixSizeReal = 0.34
pixSizeRec = 0.34
exportMatName = _data_export
firstImageBeforeChannelBegin = 1
lastImageAfterChannelEnd = 1
createResultSubDir = 1
writeStatImages = 1
writeImages = 0
enableFlag = 0
areaRatioFilterLevel = 0.7
areaRatioMax = 1.2
Converting 'M1_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1357 cell sequences
cell traces covers the whole channel: 578 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 45
write results (533 cells):
----------
----------
533 cells written
Converting 'M2_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 834 cell sequences
cell traces covers the whole channel: 479 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 70
write results (409 cells):
----------
----------
409 cells written
Converting 'M3_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 495 cell sequences
cell traces covers the whole channel: 255 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 59
write results (196 cells):
----------
----------
196 cells written
Converting 'M5_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1603 cell sequences
cell traces covers the whole channel: 790 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 61
write results (729 cells):
----------
----------
729 cells written
Converting 'M6_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1243 cell sequences
cell traces covers the whole channel: 620 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 75
write results (545 cells):
----------
----------
545 cells written
Converting 'M7_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 1271 cell sequences
cell traces covers the whole channel: 499 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 28
write results (471 cells):
----------
----------
471 cells written
Converting 'M8_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 310 cell sequences
cell traces covers the whole channel: 181 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 15
write results (166 cells):
----------
----------
166 cells written
measurement: ..\191113_Bob_HumanBlood2\191113_H04_8nlps_Warm\Online\
cell counts:
M#	Th	wholeChannel	areaRatio	written
1	1357	578	533	533
2	834	479	409	409
3	495	255	196	196
5	1603	790	729	729
6	1243	620	545	545
7	1271	499	471	471
8	310	181	166	166
